DNA Computing
- K. Komiya, M. Yamamura, and J. Rose*,
"Experimental Validation of Signal Dependent Operation in Whiplash PCR",
DNA14: The Fourteenth International Meeting on DNA Computing, Prague, Czech Republic (June 2-6, 2008), in press.
- Z. Ibrahim, M. F. M. Saaid, A. S. Paramita, A. Suyama, and J. Rose , “An Improved Readout Method of Molecular Computation based on Real-Time PCR
Implemented on DNA Engine Opticon 2 System”, IEEE Congress on Evolutionary Computation 2007, Singapore, Sept. 25-28, 2007, pp 1829-1834 .
- Z. Ibrahim, J. Rose, A. Suyama, and M. Khalid,
"Experimental Implementation and Analysis of a DNA Computing Readout Method
based on Real-Time PCR with TaqMan Probes", invited paper: International Journal of Natural Computing (in press; Published Online: 15 May 2007 ).
- J. Rose, K. Komiya, S. Yaegashi, and M. Hagiya,
"Displacement Whiplash PCR: Optimized Architecture and Experimental Validation",
DNA Computing, 12th Int'l Conference on DNA-based Computers, Seoul Korea, Springer Lecture Notes in Computer Science (LNCS Vol. 4287,
Springer-Verlag, Berlin, 2006), pp. 393-403.
- K. Komiya, S. Yaegashi, M. Hagiya, A. Suyama and J. Rose*,
"Experimental Validation of the Statistical Thermodynamic Model for Prediction
of the Behavior of Autonomous Molecular Computers Based on DNA Hairpin Formation", DNA Computing, 12th Int'l
Conference on DNA-based Computers, Seoul Korea, Springer Lecture Notes in Computer Science (LNCS Vol. 4287, Springer-Verlag, Berlin, 2006), pp. 428-438.
- Z. Ibrahim, J. Rose, Y. Tsuboi, O. Ono, and M. Khalid,
"A New Readout Approach in DNA Computing Based on Real-Time PCR with TaqMan Probes", DNA Computing, 12th Int'l Conference on
DNA-based Computers, Seoul Korea, Springer Lecture Notes in Computer Science (LNCS Vol. 4287, Springer-Verlag, Berlin, 2006), pp. 350-359.
* indicates corresponding author.
Brain Research†
- Mukai H.*, Tsurugizawa T.*, Murakami G.*, Kominami S.*, Ishii H.*, Ogiue-Ikeda M.*, Takata N.*, Tanabe N.*, Furukawa A., Hojo Y., Ooishi Y.,
Morrison J.H., Janssen J. G.M., Rose J., Chambon P., Kato S., Izumi S., Yamazaki T., Kimoto T.,
and Kawato S., "Rapid Modulation of Long-term Depression and Spinogenesis via Synaptic Estrogen Receptors in Hippocampal Principal Neurons",
J. Neurochem. 100, 950-967 (2007).
- Ishii H., Shibuya K., Ohta Y., Mukai H., Uchino S., Takata N., Rose J., and Kawato S., "Enhancement of NO production by association of
nitric oxide synthase with NMDA receptors
via PSD-95 in genetically engineered CHO cells: real-time fluorescence imaging using NO sensitive dye", J. Neurochem. 96, 1531-1539 (2006).
- N. Takata, T. Harada, J. Rose, and S. Kawato, “Spatiotemporal analysis of NO production upon NMDA- and
tetanic stimulation of the hippocampus", Hippocampus 15(4), 427-40 (2005).
† For manuscripts, please see Kawato-Laboratory (University of Tokyo, Komaba).